Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a2938
Name
Replicon chromosome
Genomic location 3622478 - 3623239 (- strand)

Cross-References

RefSeq YP_004354244.1
GI 330809782
Entrez 10471965
INSDC AEA69240.1
NCBI Locus Tag PSEBR_a2938
UniParc UPI0002040E15
UniProtKB Acc F2KGA4
UniProtKB ID F2KGA4_PSEBN
UniRef100 UniRef100_A0A0D0T2F5
UniRef50 UniRef50_Q4KC60
UniRef90 UniRef90_I2BLM5

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxyacyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.58
Kyte-Doolittle Hydrophobicity Value 0.393
Molecular Weight (kDa) 25.7
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003017 (954 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a2938

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxysteroid 17-beta dehydrogenase 10 [Source:HGNC Symbol;Acc:HGNC:4800]
E-value: 5.1e-61
Percent Identity: 53.6

References

No references are associated with this feature.