Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a1925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a1925
Name
Replicon chromosome
Genomic location 2348245 - 2348616 (+ strand)

Cross-References

RefSeq YP_004353152.1
GI 330808690
Entrez 10470869
INSDC AEA68148.1
NCBI Locus Tag PSEBR_a1925
UniParc UPI0002040DCE
UniProtKB Acc F2K9T6
UniProtKB ID F2K9T6_PSEBN
UniRef100 UniRef100_A0A0D0T7C8
UniRef50 UniRef50_A0A0D0T7C8
UniRef90 UniRef90_A0A0D0T7C8

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c
Synonyms
Evidence for Translation
Charge (pH 7) -4.97
Kyte-Doolittle Hydrophobicity Value 0.211
Molecular Weight (kDa) 12.8
Isoelectric Point (pI) 4.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 96 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004897 (786 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a1925
Search term: cytochrome c

Human Homologs

References

No references are associated with this feature.