Pseudomonas fulva 12-X, Psefu_2247

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fulva 12-X
GCF_000213805.1|latest
Locus Tag
Psefu_2247
Name
Replicon chromosome
Genomic location 2407594 - 2408244 (+ strand)

Cross-References

RefSeq YP_004474308.1
GI 333900435
EC Number 3.4.21.92
Entrez 10655178
INSDC AEF22214.1
NCBI Locus Tag Psefu_2247
UniParc UPI00020CC2B3
UniProtKB Acc F6ABM2
UniProtKB ID F6ABM2_PSEF1
UniRef100 UniRef100_F6ABM2
UniRef50 UniRef50_Q46ID4
UniRef90 UniRef90_F6ABM2

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) -5.17
Kyte-Doolittle Hydrophobicity Value -0.106
Molecular Weight (kDa) 23933.3
Isoelectric Point (pI) 5.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7M1M HYDROLASE 03/13/21 Crystal structure of Pseudomonas aeruginosa ClpP1 Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 91.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003596 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psefu_2247

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value: 6.3e-60
Percent Identity: 57.8

References

No references are associated with this feature.