Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4404

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4404
Name
Replicon chromosome
Genomic location 5027264 - 5028292 (- strand)

Cross-References

RefSeq YP_276520.1
GI 71736614
Entrez 3558997
INSDC AAZ36378.1
NCBI Locus Tag PSPPH_4404
UniParc UPI0000575F7C
UniProtKB Acc Q48DM1
UniProtKB ID Q48DM1_PSE14
UniRef100 UniRef100_Q48DM1
UniRef50 UniRef50_Q9X6V6
UniRef90 UniRef90_S3N2F5

Product

Feature Type CDS
Coding Frame 1
Product Name
RlpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 12.16
Kyte-Doolittle Hydrophobicity Value -0.309
Molecular Weight (kDa) 36.8
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 349 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001683 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4404

Human Homologs

References

No references are associated with this feature.