Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3905
Name
Replicon chromosome
Genomic location 4464164 - 4464898 (+ strand)

Cross-References

RefSeq YP_276042.1
GI 71737392
Entrez 3559798
INSDC AAZ37156.1
NCBI Locus Tag PSPPH_3905
UniParc UPI0000575DCA
UniProtKB Acc Q48EZ5
UniProtKB ID Q48EZ5_PSE14
UniRef100 UniRef100_Q48EZ5
UniRef50 UniRef50_Q9HZS1
UniRef90 UniRef90_F6AAB2

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.23
Kyte-Doolittle Hydrophobicity Value -0.074
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001274 (527 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3905

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 3.3e-17
Percent Identity: 28.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value: 3.3e-17
Percent Identity: 28.4

References

No references are associated with this feature.