Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3817

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3817
Name
Replicon chromosome
Genomic location 4368525 - 4369421 (+ strand)

Cross-References

RefSeq YP_275955.1
GI 71736202
Entrez 3558569
INSDC AAZ35966.1
NCBI Locus Tag PSPPH_3817
UniParc UPI0000575D7C
UniProtKB Acc Q48F82
UniProtKB ID Q48F82_PSE14
UniRef100 UniRef100_Q48F82
UniRef50 UniRef50_A9L4A5
UniRef90 UniRef90_Q48F82

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.67
Kyte-Doolittle Hydrophobicity Value -0.380
Molecular Weight (kDa) 33904.4
Isoelectric Point (pI) 7.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 477 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002044 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3817

Human Homologs

References

No references are associated with this feature.