Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3788

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3788
Name
Replicon chromosome
Genomic location 4337230 - 4339872 (+ strand)

Cross-References

RefSeq YP_275926.1
GI 71735625
Entrez 3557972
INSDC AAZ35389.1
NCBI Locus Tag PSPPH_3788
UniParc UPI0000575D60
UniProtKB Acc Q48FB1
UniProtKB ID Q48FB1_PSE14
UniRef100 UniRef100_Q48FB1
UniRef50 UniRef50_A0A0B7D7G3
UniRef90 UniRef90_Q87Y21

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 18.41
Kyte-Doolittle Hydrophobicity Value 0.462
Molecular Weight (kDa) 96.5
Isoelectric Point (pI) 9.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 192 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000886 (506 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3788

Human Homologs

References

No references are associated with this feature.