Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3547

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3547
Name
Replicon chromosome
Genomic location 4083477 - 4084154 (+ strand)

Cross-References

RefSeq YP_275695.1
GI 71735764
Entrez 3558118
INSDC AAZ35528.1
NCBI Locus Tag PSPPH_3547
UniParc UPI0000575C8B
UniProtKB Acc Q48FZ0
UniProtKB ID Q48FZ0_PSE14
UniRef100 UniRef100_Q48FZ0
UniRef50 UniRef50_Q4KGB4
UniRef90 UniRef90_E2XX00

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.89
Kyte-Doolittle Hydrophobicity Value -0.205
Molecular Weight (kDa) 24886.2
Isoelectric Point (pI) 5.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 622 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002411 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3547

Human Homologs

References

No references are associated with this feature.