Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3368 (fliR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3368
Name
fliR
Replicon chromosome
Genomic location 3897750 - 3898526 (- strand)

Cross-References

RefSeq YP_275526.1
GI 71735042
Entrez 3557368
INSDC AAZ34806.1
NCBI Locus Tag PSPPH_3368
UniParc UPI0000575BF2
UniProtKB Acc Q48GF7
UniProtKB ID Q48GF7_PSE14
UniRef100 UniRef100_Q48GF7
UniRef50 UniRef50_Q48GF7
UniRef90 UniRef90_Q48GF7

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliR
Synonyms
Evidence for Translation
Charge (pH 7) 0.46
Kyte-Doolittle Hydrophobicity Value 1.085
Molecular Weight (kDa) 27854.5
Isoelectric Point (pI) 7.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6S3R PROTEIN TRANSPORT 06/25/19 Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 3.5 ELECTRON MICROSCOPY 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 320 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001365 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3368
Search term: fliR

Human Homologs

References

No references are associated with this feature.