Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2804 (arnA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_2804
Name
arnA
Replicon chromosome
Genomic location 3248304 - 3250295 (+ strand)

Cross-References

RefSeq YP_274991.1
GI 71736629
Entrez 3559012
INSDC AAZ36393.1
NCBI Locus Tag PSPPH_2804
UniParc UPI00005759EB
UniProtKB Acc Q48HZ1
UniProtKB ID ARNA_PSE14
UniRef100 UniRef100_Q48HZ1
UniRef50 UniRef50_O52325
UniRef90 UniRef90_Q4ZSZ2

Product

Feature Type CDS
Coding Frame 1
Product Name
bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.49
Kyte-Doolittle Hydrophobicity Value -0.194
Molecular Weight (kDa) 73521.1
Isoelectric Point (pI) 6.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002112 (427 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_2804
Search term: arnA

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 2.8e-26
Percent Identity: 25.1
Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 2.8e-26
Percent Identity: 25.1

References

No references are associated with this feature.