Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2021 (kdpD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_2021
|
| Name |
kdpD
|
| Replicon | chromosome |
| Genomic location | 2372973 - 2375636 (+ strand) |
Cross-References
| RefSeq | YP_274242.1 |
| GI | 71735844 |
| Entrez | 3558200 |
| NCBI Locus Tag | PSPPH_2021 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
sensor protein KdpD
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.97 |
| Kyte-Doolittle Hydrophobicity Value | -0.090 |
| Molecular Weight (kDa) | 96639.0 |
| Isoelectric Point (pI) | 5.64 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 2R8R | TRANSFERASE | 09/11/07 | Crystal structure of the N-terminal region (19..243) of sensor protein KdpD from Pseudomonas syringae pv. tomato str. DC3000 | Pseudomonas syringae pv. tomato | 2.3 | X-RAY DIFFRACTION | 98.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 618 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003738 (513 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_2021
Search term: kdpD
Search term: sensor protein KdpD
|
Human Homologs
References
No references are associated with this feature.