Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1615
Name
Replicon chromosome
Genomic location 1874627 - 1875328 (- strand)

Cross-References

RefSeq YP_273861.1
GI 71733308
Entrez 3555586
INSDC AAZ33072.1
NCBI Locus Tag PSPPH_1615
UniParc UPI00005755AC
UniProtKB Acc Q48L64
UniProtKB ID Q48L64_PSE14
UniRef100 UniRef100_Q48L64
UniRef50 UniRef50_Q87YD7
UniRef90 UniRef90_K2SID6

Product

Feature Type CDS
Coding Frame 1
Product Name
autoinducer transcriptional regulator AhlR
Synonyms
Evidence for Translation
Charge (pH 7) 9.09
Kyte-Doolittle Hydrophobicity Value -0.328
Molecular Weight (kDa) 26.6
Isoelectric Point (pI) 9.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 239 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1615

Human Homologs

References

No references are associated with this feature.