Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_1117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_1117
Name
Replicon chromosome
Genomic location 1315677 - 1317158 (- strand)

Cross-References

RefSeq YP_273385.1
GI 71734079
Entrez 3556381
INSDC AAZ33843.1
NCBI Locus Tag PSPPH_1117
UniParc UPI0000575407
UniProtKB Acc Q48MI7
UniProtKB ID Q48MI7_PSE14
UniRef100 UniRef100_Q48MI7
UniRef50 UniRef50_Q52463
UniRef90 UniRef90_Q887P9

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate biosynthesis protein Alg8
Synonyms
Evidence for Translation
Charge (pH 7) 23.27
Kyte-Doolittle Hydrophobicity Value 0.226
Molecular Weight (kDa) 56032.1
Isoelectric Point (pI) 10.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 10 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002125 (492 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_1117

Human Homologs

References

No references are associated with this feature.