Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0468

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0468
Name
Replicon chromosome
Genomic location 531295 - 531981 (- strand)

Cross-References

RefSeq YP_272771.1
GI 71737988
Entrez 3560416
INSDC AAZ37752.1
NCBI Locus Tag PSPPH_0468
UniParc UPI00005751BE
UniProtKB Acc Q48P98
UniProtKB ID Q48P98_PSE14
UniRef100 UniRef100_Q48P98
UniRef50 UniRef50_P52055
UniRef90 UniRef90_Q87V93

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.13
Kyte-Doolittle Hydrophobicity Value -0.078
Molecular Weight (kDa) 24.6
Isoelectric Point (pI) 6.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000385 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0468

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal phosphate binding protein [Source:HGNC Symbol;Acc:HGNC:9457]
E-value: 5.1e-28
Percent Identity: 37.4

References

No references are associated with this feature.