Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_0079

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_0079
Name
Replicon chromosome
Genomic location 84615 - 86279 (- strand)

Cross-References

RefSeq YP_272391.1
GI 71736508
Entrez 3558887
INSDC AAZ36272.1
NCBI Locus Tag PSPPH_0079
UniParc UPI000057505C
UniProtKB Acc Q48QC5
UniProtKB ID Q48QC5_PSE14
UniRef100 UniRef100_Q48QC5
UniRef50 UniRef50_A0A0B7DH21
UniRef90 UniRef90_D7HTD9

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -8.57
Kyte-Doolittle Hydrophobicity Value -0.090
Molecular Weight (kDa) 61.9
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 453 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004870 (523 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_0079

Human Homologs

References

No references are associated with this feature.