Pseudomonas syringae pv. tomato DC3000, PSPTO_5482

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5482
NCBI Old Locus TagPSPTO5482
Name
Synonym: PSPTO5482
Replicon chromosome
Genomic location 6246533 - 6247426 (- strand)

Cross-References

RefSeq NP_795206.1
GI 28872587
Entrez 1187174
INSDC AAO58901.1
NCBI Locus Tag PSPTO_5482
NCBI Old Locus Tag PSPTO5482
UniParc UPI00000096C6
UniProtKB Acc Q87U33
UniProtKB ID Q87U33_PSESM
UniRef100 UniRef100_Q87U33
UniRef50 UniRef50_Q4K3L1
UniRef90 UniRef90_Q87U33

Product

Feature Type CDS
Coding Frame 1
Product Name
response regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.63
Kyte-Doolittle Hydrophobicity Value -0.140
Molecular Weight (kDa) 32.3
Isoelectric Point (pI) 8.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004929 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5482

Human Homologs

References

No references are associated with this feature.