Pseudomonas syringae pv. tomato DC3000, PSPTO_5433

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5433
NCBI Old Locus Tag	PSPTO5433
Name	Synonym: PSPTO5433
Replicon	chromosome
Genomic location	6178225 - 6178731 (- strand)

Cross-References

RefSeq	NP_795160.1
GI	28872541
Entrez	1187120
INSDC	AAO58855.1
NCBI Locus Tag	PSPTO_5433
NCBI Old Locus Tag	PSPTO5433
UniParc	UPI000000969C
UniProtKB Acc	Q87U75
UniProtKB ID	Q87U75_PSESM
UniRef100	UniRef100_Q87U75
UniRef50	UniRef50_Q9KN58
UniRef90	UniRef90_I4Y467

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.75
Kyte-Doolittle Hydrophobicity Value	-0.463
Molecular Weight (kDa)	18.5
Isoelectric Point (pI)	4.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 105 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000082 (1224 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5433

Human Homologs

References