Pseudomonas syringae pv. tomato DC3000, PSPTO_5430

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5430
NCBI Old Locus Tag	PSPTO5430
Name	Synonym: PSPTO5430
Replicon	chromosome
Genomic location	6175762 - 6176286 (- strand)

Cross-References

RefSeq	NP_795157.1
GI	28872538
Entrez	1187117
INSDC	AAO58852.1
NCBI Locus Tag	PSPTO_5430
NCBI Old Locus Tag	PSPTO5430
UniParc	UPI0000009699
UniProtKB Acc	Q87U78
UniProtKB ID	Q87U78_PSESM
UniRef100	UniRef100_Q87U78
UniRef50	UniRef50_Q9I5B5
UniRef90	UniRef90_Q87U78

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.14
Kyte-Doolittle Hydrophobicity Value	0.048
Molecular Weight (kDa)	17.5
Isoelectric Point (pI)	5.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 74 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000092 (1670 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5430

Human Homologs

References