Pseudomonas syringae pv. tomato DC3000, PSPTO_5423

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5423
NCBI Old Locus Tag	PSPTO5423
Name	Synonym: PSPTO5423
Replicon	chromosome
Genomic location	6164819 - 6164983 (- strand)

Cross-References

RefSeq	NP_795150.1
GI	28872531
Entrez	1187110
INSDC	AAO58845.1
NCBI Locus Tag	PSPTO_5423
NCBI Old Locus Tag	PSPTO5423
UniParc	UPI0000009693
UniProtKB Acc	Q87U84
UniProtKB ID	Q87U84_PSESM
UniRef100	UniRef100_Q87U84
UniRef50	UniRef50_Q87U84
UniRef90	UniRef90_Q87U84

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	2.40
Kyte-Doolittle Hydrophobicity Value	-0.107
Molecular Weight (kDa)	5.9
Isoelectric Point (pI)	8.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003719 (396 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5423

Human Homologs

References