Pseudomonas syringae pv. tomato DC3000, PSPTO_5300

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5300
NCBI Old Locus Tag	PSPTO5300
Name	Synonym: PSPTO5300
Replicon	chromosome
Genomic location	6025145 - 6027532 (+ strand)

Cross-References

RefSeq	NP_795031.1
GI	28872412
Entrez	1186985
INSDC	AAO58726.1
NCBI Locus Tag	PSPTO_5300
NCBI Old Locus Tag	PSPTO5300
UniParc	UPI0000009622
UniProtKB Acc	Q87UJ6
UniProtKB ID	Q87UJ6_PSESM
UniRef100	UniRef100_Q87UJ6
UniRef50	UniRef50_D7I6B0
UniRef90	UniRef90_D7I6B0

Product

Feature Type	CDS
Coding Frame	1
Product Name	penicillin amidase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-20.67
Kyte-Doolittle Hydrophobicity Value	-0.339
Molecular Weight (kDa)	88.1
Isoelectric Point (pI)	5.24

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 222 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000302 (493 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5300 Search term: penicillin amidase family protein

Human Homologs

References