Pseudomonas syringae pv. tomato DC3000, PSPTO_5046

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_5046
NCBI Old Locus TagPSPTO5046
Name
Synonym: PSPTO5046
Replicon chromosome
Genomic location 5745884 - 5746570 (+ strand)

Cross-References

RefSeq NP_794779.1
GI 28872160
Entrez 1186731
INSDC AAO58474.1
NCBI Locus Tag PSPTO_5046
NCBI Old Locus Tag PSPTO5046
UniParc UPI000000952B
UniProtKB Acc Q87V93
UniProtKB ID Q87V93_PSESM
UniRef100 UniRef100_Q87V93
UniRef50 UniRef50_P52055
UniRef90 UniRef90_Q87V93

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.37
Kyte-Doolittle Hydrophobicity Value -0.081
Molecular Weight (kDa) 24.4
Isoelectric Point (pI) 5.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000385 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_5046

Human Homologs

Ensembl 110, assembly GRCh38.p14
pyridoxal phosphate binding protein [Source:HGNC Symbol;Acc:HGNC:9457]
E-value: 2.7e-29
Percent Identity: 38.7

References

No references are associated with this feature.