Pseudomonas syringae pv. tomato DC3000, PSPTO_4865 (fis)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4865
NCBI Old Locus Tag	PSPTO4865
Name	fis Synonym: PSPTO4865
Replicon	chromosome
Genomic location	5510619 - 5510933 (+ strand)

Cross-References

RefSeq	NP_794599.1
GI	28871980
Entrez	1186548
INSDC	AAO58294.1
NCBI Locus Tag	PSPTO_4865
NCBI Old Locus Tag	PSPTO4865
UniParc	UPI000000947A
UniProtKB Acc	Q87VS0
UniProtKB ID	Q87VS0_PSESM
UniRef100	UniRef100_A0A0C1ZTJ4
UniRef50	UniRef50_Q5QVV0
UniRef90	UniRef90_I4CPV3

Product

Feature Type	CDS
Coding Frame	1
Product Name	global DNA-binding transcriptional dual regulator Fis
Synonyms
Evidence for Translation
Charge (pH 7)	-1.29
Kyte-Doolittle Hydrophobicity Value	-0.344
Molecular Weight (kDa)	11.5
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 197 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004482 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4865 Search term: fis Search term: global DNA-binding transcriptional dual regulator Fis

Human Homologs

References