Pseudomonas syringae pv. tomato DC3000, PSPTO_4796

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4796
NCBI Old Locus Tag	PSPTO4796
Name	Synonym: PSPTO4796
Replicon	chromosome
Genomic location	5436176 - 5438182 (- strand)

Cross-References

RefSeq	NP_794530.1
GI	28871911
Entrez	1186479
INSDC	AAO58225.1
NCBI Locus Tag	PSPTO_4796
NCBI Old Locus Tag	PSPTO4796
UniParc	UPI0000009435
UniProtKB Acc	Q87VY9
UniProtKB ID	Q87VY9_PSESM
UniRef100	UniRef100_Q87VY9
UniRef50	UniRef50_W0YUZ0
UniRef90	UniRef90_Q87VY9

Product

Feature Type	CDS
Coding Frame	1
Product Name	sensor histidine kinase
Synonyms
Evidence for Translation
Charge (pH 7)	-7.80
Kyte-Doolittle Hydrophobicity Value	0.162
Molecular Weight (kDa)	74.3
Isoelectric Point (pI)	5.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002178 (1344 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4796 Search term: sensor histidine kinase

Human Homologs

References