Pseudomonas syringae pv. tomato DC3000, PSPTO_4502 (carA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4502
NCBI Old Locus Tag	PSPTO4502
Name	carA Synonym: PSPTO4502
Replicon	chromosome
Genomic location	5072095 - 5073231 (- strand)

Cross-References

RefSeq	NP_794255.1
GI	28871636
Entrez	1186185
INSDC	AAO57950.1
NCBI Locus Tag	PSPTO_4502
NCBI Old Locus Tag	PSPTO4502
UniParc	UPI000000933B
UniProtKB Acc	Q87WP3
UniProtKB ID	CARA_PSESM
UniRef100	UniRef100_Q87WP3
UniRef50	UniRef50_P0A6F2
UniRef90	UniRef90_Q87WP3

Product

Feature Type	CDS
Coding Frame	1
Product Name	carbamoyl-phosphate synthase small subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-8.23
Kyte-Doolittle Hydrophobicity Value	-0.134
Molecular Weight (kDa)	40.7
Isoelectric Point (pI)	5.74

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004402 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4502 Search term: carA Search term: carbamoyl-phosphate synthase small subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000384510 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424] E-value: 3.7e-63 Percent Identity: 38.6
Ensembl 110, assembly GRCh38.p14	ENSP00000264705 carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424] E-value: 3.7e-63 Percent Identity: 38.6

References