Pseudomonas syringae pv. tomato DC3000, PSPTO_4480

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4480
NCBI Old Locus Tag	PSPTO4480
Name	Synonym: PSPTO4480
Replicon	chromosome
Genomic location	5043826 - 5045409 (- strand)

Cross-References

RefSeq	NP_794234.1
GI	28871615
Entrez	1186161
INSDC	AAO57929.1
NCBI Locus Tag	PSPTO_4480
NCBI Old Locus Tag	PSPTO4480
UniParc	UPI0000009327
UniProtKB Acc	Q87WR3
UniProtKB ID	Q87WR3_PSESM
UniRef100	UniRef100_Q87WR3
UniRef50	UniRef50_Q1LK66
UniRef90	UniRef90_Q48E86

Product

Feature Type	CDS
Coding Frame	1
Product Name	Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.62
Kyte-Doolittle Hydrophobicity Value	-0.366
Molecular Weight (kDa)	59.0
Isoelectric Point (pI)	5.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Extracellular Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 155 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001766 (433 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4480 Search term: Tat (twin-arginine translocation) pathway signal sequence domain-containing protein

Human Homologs

References