Pseudomonas syringae pv. tomato DC3000, PSPTO_4450

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4450
NCBI Old Locus Tag	PSPTO4450
Name	Synonym: PSPTO4450
Replicon	chromosome
Genomic location	5015213 - 5015785 (+ strand)

Cross-References

RefSeq	NP_794204.1
GI	28871585
Entrez	1186131
INSDC	AAO57899.1
NCBI Locus Tag	PSPTO_4450
NCBI Old Locus Tag	PSPTO4450
UniParc	UPI0000009309
UniProtKB Acc	Q87WU3
UniProtKB ID	Q87WU3_PSESM
UniRef100	UniRef100_Q87WU3
UniRef50	UniRef50_Q87WU3
UniRef90	UniRef90_Q87WU3

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.29
Kyte-Doolittle Hydrophobicity Value	-0.355
Molecular Weight (kDa)	21.5
Isoelectric Point (pI)	5.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 50 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004048 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4450

Human Homologs

References