Pseudomonas syringae pv. tomato DC3000, PSPTO_4376 (groEL)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_4376
NCBI Old Locus TagPSPTO4376
Name
groEL
Synonym: PSPTO4376
Replicon chromosome
Genomic location 4938343 - 4939986 (- strand)

Cross-References

RefSeq NP_794131.1
GI 28871512
Entrez 1186057
INSDC AAO57826.1
NCBI Locus Tag PSPTO_4376
NCBI Old Locus Tag PSPTO4376
UniParc UPI00000092C2
UniProtKB Acc Q87X14
UniProtKB ID CH60_PSESM
UniRef100 UniRef100_Q87X14
UniRef50 UniRef50_O66200
UniRef90 UniRef90_Q4K764

Product

Feature Type CDS
Coding Frame 1
Product Name
chaperonin, 60 kDa
Synonyms
Evidence for Translation
Charge (pH 7) -13.26
Kyte-Doolittle Hydrophobicity Value -0.011
Molecular Weight (kDa) 57.1
Isoelectric Point (pI) 4.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 666 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003976 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_4376
Search term: groEL

Human Homologs

Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
heat shock protein family D (Hsp60) member 1 [Source:HGNC Symbol;Acc:HGNC:5261]
E-value: 7.7e-147
Percent Identity: 51.6

References

No references are associated with this feature.