Pseudomonas syringae pv. tomato DC3000, PSPTO_3845 (lpxK)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3845
NCBI Old Locus Tag	PSPTO3845
Name	lpxK Synonym: PSPTO3845
Replicon	chromosome
Genomic location	4352908 - 4353903 (- strand)

Cross-References

RefSeq	NP_793617.1
GI	28870998
Entrez	1185516
INSDC	AAO57312.1
NCBI Locus Tag	PSPTO_3845
NCBI Old Locus Tag	PSPTO3845
UniParc	UPI00000090D5
UniProtKB Acc	Q87YF5
UniProtKB ID	LPXK_PSESM
UniRef100	UniRef100_Q87YF5
UniRef50	UniRef50_Q87YF5
UniRef90	UniRef90_Q87YF5

Product

Feature Type	CDS
Coding Frame	1
Product Name	tetraacyldisaccharide 4'-kinase
Synonyms
Evidence for Translation
Charge (pH 7)	0.59
Kyte-Doolittle Hydrophobicity Value	-0.041
Molecular Weight (kDa)	36.4
Isoelectric Point (pI)	7.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 346 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002601 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3845 Search term: lpxK Search term: tetraacyldisaccharide 4'-kinase

Human Homologs

References