Pseudomonas syringae pv. tomato DC3000, PSPTO_3818

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3818
NCBI Old Locus Tag	PSPTO3818
Name	Synonym: PSPTO3818
Replicon	chromosome
Genomic location	4325920 - 4328763 (- strand)

Cross-References

RefSeq	NP_793591.1
GI	28870972
Entrez	1185489
INSDC	AAO57286.1
NCBI Locus Tag	PSPTO_3818
NCBI Old Locus Tag	PSPTO3818
UniParc	UPI00000090BB
UniProtKB Acc	Q87YI0
UniProtKB ID	Q87YI0_PSESM
UniRef100	UniRef100_Q87YI0
UniRef50	UniRef50_Q87YI0
UniRef90	UniRef90_Q87YI0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-81.43
Kyte-Doolittle Hydrophobicity Value	-0.217
Molecular Weight (kDa)	99.4
Isoelectric Point (pI)	4.02

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 90 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002483 (530 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3818

Human Homologs

References