Pseudomonas syringae pv. tomato DC3000, PSPTO_3726 (clpP-2)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3726
NCBI Old Locus Tag	PSPTO3726
Name	clpP-2 Synonym: PSPTO3726
Replicon	chromosome
Genomic location	4208232 - 4208882 (- strand)

Cross-References

RefSeq	NP_793500.1
GI	28870881
Entrez	1185391
INSDC	AAO57195.1
NCBI Locus Tag	PSPTO_3726
NCBI Old Locus Tag	PSPTO3726
UniParc	UPI0000219467
UniProtKB Acc	Q87YR6
UniProtKB ID	CLPP_PSESM
UniRef100	UniRef100_Q48KZ0
UniRef50	UniRef50_Q9I2U1
UniRef90	UniRef90_Q48KZ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent Clp protease, proteolytic subunit ClpP
Synonyms
Evidence for Translation
Charge (pH 7)	-5.17
Kyte-Doolittle Hydrophobicity Value	-0.213
Molecular Weight (kDa)	24.0
Isoelectric Point (pI)	5.82

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003596 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3726 Search term: clpP-2 Search term: ATP-dependent Clp protease, proteolytic subunit ClpP

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000245816 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084] E-value: 5.7e-61 Percent Identity: 57.4

References