Pseudomonas syringae pv. tomato DC3000, PSPTO_3603

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3603
NCBI Old Locus Tag	PSPTO3603
Name	Synonym: PSPTO3603
Replicon	chromosome
Genomic location	4062841 - 4063530 (+ strand)

Cross-References

RefSeq	NP_793382.1
GI	28870763
Entrez	1185268
INSDC	AAO57077.1
NCBI Locus Tag	PSPTO_3603
NCBI Old Locus Tag	PSPTO3603
UniParc	UPI0000008FF5
UniProtKB Acc	Q87Z28
UniProtKB ID	Q87Z28_PSESM
UniRef100	UniRef100_A0A038GC01
UniRef50	UniRef50_Q44006
UniRef90	UniRef90_Q4ZR16

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding heavy metal response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-2.38
Kyte-Doolittle Hydrophobicity Value	-0.084
Molecular Weight (kDa)	26.3
Isoelectric Point (pI)	6.40

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001354 (1369 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3603 Search term: DNA-binding heavy metal response regulator

Human Homologs

References