Pseudomonas syringae pv. tomato DC3000, PSPTO_3480

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3480
NCBI Old Locus Tag	PSPTO3480
Name	Synonym: PSPTO3480
Replicon	chromosome
Genomic location	3926984 - 3928585 (- strand)

Cross-References

RefSeq	NP_793260.1
GI	28870641
Entrez	1185145
INSDC	AAO56955.1
NCBI Locus Tag	PSPTO_3480
NCBI Old Locus Tag	PSPTO3480
UniParc	UPI0000008F7C
UniProtKB Acc	Q87ZE9
UniProtKB ID	Q87ZE9_PSESM
UniRef100	UniRef100_Q87ZE9
UniRef50	UniRef50_Q4KDH9
UniRef90	UniRef90_Q48GZ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	methyl-accepting chemotaxis protein
Synonyms
Evidence for Translation
Charge (pH 7)	-9.42
Kyte-Doolittle Hydrophobicity Value	-0.222
Molecular Weight (kDa)	57.7
Isoelectric Point (pI)	5.50

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 398 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003893 (457 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3480 Search term: methyl-accepting chemotaxis protein

Human Homologs

References