Pseudomonas syringae pv. tomato DC3000, PSPTO_3381

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3381
NCBI Old Locus Tag	PSPTO3381
Name	Synonym: PSPTO3381
Replicon	chromosome
Genomic location	3823188 - 3823856 (- strand)

Cross-References

RefSeq	NP_793164.1
GI	28870545
Entrez	1185040
INSDC	AAO56859.1
NCBI Locus Tag	PSPTO_3381
NCBI Old Locus Tag	PSPTO3381
UniParc	UPI0000008F1E
UniProtKB Acc	Q87ZP3
UniProtKB ID	Q87ZP3_PSESM
UniRef100	UniRef100_Q87ZP3
UniRef50	UniRef50_E2XPN1
UniRef90	UniRef90_Q87ZP3

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-4.11
Kyte-Doolittle Hydrophobicity Value	-0.306
Molecular Weight (kDa)	24.6
Isoelectric Point (pI)	6.09

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002900 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3381 Search term: DNA-binding response regulator

Human Homologs

References