Pseudomonas syringae pv. tomato DC3000, PSPTO_3342

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3342
NCBI Old Locus Tag	PSPTO3342
Name	Synonym: PSPTO3342
Replicon	chromosome
Genomic location	3777246 - 3778247 (+ strand)

Cross-References

RefSeq	NP_793125.1
GI	28870506
Entrez	1185001
INSDC	AAO56820.1
NCBI Locus Tag	PSPTO_3342
NCBI Old Locus Tag	PSPTO3342
UniParc	UPI0000008EF7
UniProtKB Acc	Q87ZT2
UniProtKB ID	Q87ZT2_PSESM
UniRef100	UniRef100_Q87ZT2
UniRef50	UniRef50_D7I1C2
UniRef90	UniRef90_D7I1C2

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.44
Kyte-Doolittle Hydrophobicity Value	-0.307
Molecular Weight (kDa)	37.1
Isoelectric Point (pI)	6.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 314 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002942 (486 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3342

Human Homologs

References