Pseudomonas syringae pv. tomato DC3000, PSPTO_2240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2240
NCBI Old Locus TagPSPTO2240
Name
Synonym: PSPTO2240
Replicon chromosome
Genomic location 2481297 - 2481560 (- strand)

Cross-References

RefSeq NP_792061.1
GI 28869442
Entrez 1183891
INSDC AAO55756.1
NCBI Locus Tag PSPTO_2240
NCBI Old Locus Tag PSPTO2240
UniParc UPI0000008AF3
UniProtKB Acc Q883V8
UniProtKB ID Q883V8_PSESM
UniRef100 UniRef100_Q883V8
UniRef50 UniRef50_Q883V8
UniRef90 UniRef90_Q883V8

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 4.43
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 9.6
Isoelectric Point (pI) 10.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 174 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2240

Human Homologs

References

No references are associated with this feature.