Pseudomonas syringae pv. tomato DC3000, PSPTO_5624 (pvdP)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_5624
Name	pvdP
Replicon	chromosome
Genomic location	2367818 - 2369452 (+ strand)

Cross-References

RefSeq	NP_791979.2
GI	170660218
Entrez	1183804
INSDC	AAO55674.2
NCBI Locus Tag	PSPTO_5624
UniParc	UPI0000EA235E
UniProtKB Acc	Q884D6
UniProtKB ID	Q884D6_PSESM
UniRef100	UniRef100_Q884D6
UniRef50	UniRef50_Q4K9A0
UniRef90	UniRef90_Q884D6

Product

Feature Type	CDS
Coding Frame	1
Product Name	Tat (twin-arginine translocation) pathway signal sequence domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.21
Kyte-Doolittle Hydrophobicity Value	-0.623
Molecular Weight (kDa)	62.5
Isoelectric Point (pI)	6.60

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003135 (466 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_5624 Search term: pvdP Search term: Tat (twin-arginine translocation) pathway signal sequence domain-containing protein

Human Homologs

References