Pseudomonas syringae pv. tomato DC3000, PSPTO_2143

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2143
NCBI Old Locus Tag	PSPTO2143
Name	Synonym: PSPTO2143
Replicon	chromosome
Genomic location	2326990 - 2327322 (- strand)

Cross-References

RefSeq	NP_791965.1
GI	28869346
Entrez	1183790
INSDC	AAO55660.1
NCBI Locus Tag	PSPTO_2143
NCBI Old Locus Tag	PSPTO2143
UniParc	UPI0000008A96
UniProtKB Acc	Q884F0
UniProtKB ID	Q884F0_PSESM
UniRef100	UniRef100_Q884F0
UniRef50	UniRef50_Q884F0
UniRef90	UniRef90_Q884F0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-6.65
Kyte-Doolittle Hydrophobicity Value	0.012
Molecular Weight (kDa)	11.6
Isoelectric Point (pI)	4.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 26 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003127 (483 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2143

Human Homologs

References