Pseudomonas syringae pv. tomato DC3000, PSPTO_2048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_2048
NCBI Old Locus TagPSPTO2048
Name
Synonym: PSPTO2048
Replicon chromosome
Genomic location 2230681 - 2231403 (+ strand)

Cross-References

RefSeq NP_791871.1
GI 28869252
Entrez 1183693
INSDC AAO55566.1
NCBI Locus Tag PSPTO_2048
NCBI Old Locus Tag PSPTO2048
UniParc UPI0000008A39
UniProtKB Acc Q884P0
UniProtKB ID Q884P0_PSESM
UniRef100 UniRef100_A0A038GAD1
UniRef50 UniRef50_Q4ZVB7
UniRef90 UniRef90_A0A038GAD1

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.29
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 208 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_2048

Human Homologs

References

No references are associated with this feature.