Pseudomonas syringae pv. tomato DC3000, PSPTO_2004 (ccoN)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2004
NCBI Old Locus Tag	PSPTO2004
Name	ccoN Synonym: PSPTO2004
Replicon	chromosome
Genomic location	2186515 - 2187957 (- strand)

Cross-References

RefSeq	NP_791827.1
GI	28869208
Entrez	1183649
INSDC	AAO55522.1
NCBI Locus Tag	PSPTO_2004
NCBI Old Locus Tag	PSPTO2004
UniParc	UPI0000008A0F
UniProtKB Acc	Q884T2
UniProtKB ID	Q884T2_PSESM
UniRef100	UniRef100_Q884T2
UniRef50	UniRef50_Q9I3G0
UniRef90	UniRef90_Q48GI8

Product

Feature Type	CDS
Coding Frame	1
Product Name	cbb3-type cytochrome c oxidase subunit I
Synonyms
Evidence for Translation
Charge (pH 7)	14.23
Kyte-Doolittle Hydrophobicity Value	0.561
Molecular Weight (kDa)	53.6
Isoelectric Point (pI)	9.64

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 272 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001566 (1638 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2004 Search term: ccoN Search term: cbb3-type cytochrome c oxidase subunit I

Human Homologs

References