Pseudomonas syringae pv. tomato DC3000, PSPTO_2002 (ccoQ)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2002
NCBI Old Locus Tag	PSPTO2002
Name	ccoQ Synonym: PSPTO2002
Replicon	chromosome
Genomic location	2185710 - 2185901 (- strand)

Cross-References

RefSeq	NP_791825.1
GI	28869206
Entrez	1183647
INSDC	AAO55520.1
NCBI Locus Tag	PSPTO_2002
NCBI Old Locus Tag	PSPTO2002
UniParc	UPI0000008A0D
UniProtKB Acc	Q884T4
UniProtKB ID	Q884T4_PSESM
UniRef100	UniRef100_Q884T4
UniRef50	UniRef50_Q4KFE5
UniRef90	UniRef90_Q48GI6

Product

Feature Type	CDS
Coding Frame	1
Product Name	cytochrome c oxidase, cbb3-type, CcoQ subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-2.01
Kyte-Doolittle Hydrophobicity Value	0.175
Molecular Weight (kDa)	7.0
Isoelectric Point (pI)	4.61

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 37 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG008385 (847 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2002 Search term: ccoQ Search term: cytochrome c oxidase, cbb3-type, CcoQ subunit

Human Homologs

References