Pseudomonas syringae pv. tomato DC3000, PSPTO_1971 (fliO)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1971
NCBI Old Locus Tag	PSPTO1971
Name	fliO Synonym: PSPTO1971
Replicon	chromosome
Genomic location	2156681 - 2157121 (+ strand)

Cross-References

RefSeq	NP_791794.1
GI	28869175
Entrez	1183616
INSDC	AAO55489.1
NCBI Locus Tag	PSPTO_1971
NCBI Old Locus Tag	PSPTO1971
UniParc	UPI00000089EE
UniProtKB Acc	Q884W5
UniProtKB ID	Q884W5_PSESM
UniRef100	UniRef100_Q884W5
UniRef50	UniRef50_Q4KG57
UniRef90	UniRef90_Q884W5

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar protein FliO
Synonyms
Evidence for Translation
Charge (pH 7)	6.47
Kyte-Doolittle Hydrophobicity Value	0.289
Molecular Weight (kDa)	16.0
Isoelectric Point (pI)	11.46

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 79 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001362 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1971 Search term: fliO Search term: flagellar protein FliO

Human Homologs

References