Pseudomonas syringae pv. tomato DC3000, PSPTO_1857

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1857
NCBI Old Locus TagPSPTO1857
Name
Synonym: PSPTO1857
Replicon chromosome
Genomic location 2031166 - 2032194 (- strand)

Cross-References

RefSeq NP_791681.1
GI 28869062
Entrez 1183502
INSDC AAO55376.1
NCBI Locus Tag PSPTO_1857
NCBI Old Locus Tag PSPTO1857
UniParc UPI000000897E
UniProtKB Acc Q885H6
UniProtKB ID Q885H6_PSESM
UniRef100 UniRef100_Q885H6
UniRef50 UniRef50_T5L9W0
UniRef90 UniRef90_Q885H6

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.95
Kyte-Doolittle Hydrophobicity Value 0.024
Molecular Weight (kDa) 37.2
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 386 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001883 (1422 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1857

Human Homologs

References

No references are associated with this feature.