Pseudomonas syringae pv. tomato DC3000, PSPTO_1806

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1806
NCBI Old Locus Tag	PSPTO1806
Name	Synonym: PSPTO1806
Replicon	chromosome
Genomic location	1977171 - 1977848 (- strand)

Cross-References

RefSeq	NP_791631.1
GI	28869012
Entrez	1183447
INSDC	AAO55326.1
NCBI Locus Tag	PSPTO_1806
NCBI Old Locus Tag	PSPTO1806
UniParc	UPI000000894C
UniProtKB Acc	Q885M5
UniProtKB ID	Q885M5_PSESM
UniRef100	UniRef100_A0A038G7B5
UniRef50	UniRef50_Q4KGB4
UniRef90	UniRef90_E2XX00

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-5.92
Kyte-Doolittle Hydrophobicity Value	-0.182
Molecular Weight (kDa)	24.9
Isoelectric Point (pI)	5.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 622 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002411 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1806 Search term: DNA-binding response regulator

Human Homologs

References