Pseudomonas syringae pv. tomato DC3000, PSPTO_1671 (nrdA)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1671
NCBI Old Locus Tag	PSPTO1671
Name	nrdA Synonym: PSPTO1671
Replicon	chromosome
Genomic location	1840004 - 1842916 (- strand)

Cross-References

RefSeq	NP_791496.1
GI	28868877
Entrez	1183308
INSDC	AAO55191.1
NCBI Locus Tag	PSPTO_1671
NCBI Old Locus Tag	PSPTO1671
UniParc	UPI00000088C5
UniProtKB Acc	Q886B0
UniProtKB ID	Q886B0_PSESM
UniRef100	UniRef100_Q886B0
UniRef50	UniRef50_Q886B0
UniRef90	UniRef90_Q886B0

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribonucleotide-diphosphate reductase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7)	-13.68
Kyte-Doolittle Hydrophobicity Value	-0.306
Molecular Weight (kDa)	107.9
Isoelectric Point (pI)	5.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 610 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001115 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1671 Search term: nrdA Search term: ribonucleotide-diphosphate reductase subunit alpha

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000300738 ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451] E-value: 2.0e-153 Percent Identity: 40.8

References