Pseudomonas syringae pv. tomato DC3000, PSPTO_1307

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1307
NCBI Old Locus Tag	PSPTO1307
Name	Synonym: PSPTO1307
Replicon	chromosome
Genomic location	1436744 - 1437421 (- strand)

Cross-References

RefSeq	NP_791136.1
GI	28868517
Entrez	1182943
INSDC	AAO54831.1
NCBI Locus Tag	PSPTO_1307
NCBI Old Locus Tag	PSPTO1307
UniParc	UPI0000008764
UniProtKB Acc	Q887I5
UniProtKB ID	Q887I5_PSESM
UniRef100	UniRef100_Q887I5
UniRef50	UniRef50_Q4K6K4
UniRef90	UniRef90_Q4K6K4

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding heavy metal response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-0.55
Kyte-Doolittle Hydrophobicity Value	-0.149
Molecular Weight (kDa)	25.2
Isoelectric Point (pI)	6.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001354 (1369 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1307 Search term: DNA-binding heavy metal response regulator

Human Homologs

References