Pseudomonas syringae pv. tomato DC3000, PSPTO_1241

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1241
NCBI Old Locus Tag	PSPTO1241
Name	Synonym: PSPTO1241
Replicon	chromosome
Genomic location	1363409 - 1364581 (- strand)

Cross-References

RefSeq	NP_791071.1
GI	28868452
Entrez	1182877
INSDC	AAO54766.1
NCBI Locus Tag	PSPTO_1241
NCBI Old Locus Tag	PSPTO1241
UniParc	UPI0000008723
UniProtKB Acc	Q887Q0
UniProtKB ID	ALG44_PSESM
UniRef100	UniRef100_Q887Q0
UniRef50	UniRef50_Q887Q0
UniRef90	UniRef90_Q887Q0

Product

Feature Type	CDS
Coding Frame	1
Product Name	alginate biosynthesis protein Alg44
Synonyms
Evidence for Translation
Charge (pH 7)	2.12
Kyte-Doolittle Hydrophobicity Value	0.008
Molecular Weight (kDa)	41.8
Isoelectric Point (pI)	8.08

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002124 (491 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1241 Search term: alginate biosynthesis protein Alg44

Human Homologs

References