Pseudomonas syringae pv. tomato DC3000, PSPTO_0977

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0977
NCBI Old Locus Tag	PSPTO0977
Name	Synonym: PSPTO0977
Replicon	chromosome
Genomic location	1061359 - 1063680 (+ strand)

Cross-References

RefSeq	NP_790816.1
GI	28868197
Entrez	1182606
INSDC	AAO54511.1
NCBI Locus Tag	PSPTO_0977
NCBI Old Locus Tag	PSPTO0977
UniParc	UPI0000008633
UniProtKB Acc	Q888P0
UniProtKB ID	Q888P0_PSESM
UniRef100	UniRef100_A0A038GF81
UniRef50	UniRef50_Q1I4R0
UniRef90	UniRef90_Q4ZY72

Product

Feature Type	CDS
Coding Frame	1
Product Name	penicillin-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	7.89
Kyte-Doolittle Hydrophobicity Value	-0.208
Molecular Weight (kDa)	84.8
Isoelectric Point (pI)	9.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 555 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004349 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0977 Search term: penicillin-binding protein

Human Homologs

References