Pseudomonas syringae pv. tomato DC3000, PSPTO_0679

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0679
NCBI Old Locus Tag	PSPTO0679
Name	Synonym: PSPTO0679
Replicon	chromosome
Genomic location	736029 - 736715 (- strand)

Cross-References

RefSeq	NP_790526.1
GI	28867907
Entrez	1182299
INSDC	AAO54221.1
NCBI Locus Tag	PSPTO_0679
NCBI Old Locus Tag	PSPTO0679
UniParc	UPI000000851A
UniProtKB Acc	Q889S0
UniProtKB ID	Q889S0_PSESM
UniRef100	UniRef100_Q889S0
UniRef50	UniRef50_Q88QI8
UniRef90	UniRef90_Q889S0

Product

Feature Type	CDS
Coding Frame	1
Product Name	outer membrane protein OmpW
Synonyms
Evidence for Translation
Charge (pH 7)	-5.81
Kyte-Doolittle Hydrophobicity Value	-0.026
Molecular Weight (kDa)	24.4
Isoelectric Point (pI)	4.97

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 151 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001618 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0679 Search term: outer membrane protein OmpW

Human Homologs

References