Pseudomonas syringae pv. tomato DC3000, PSPTO_0464

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0464
NCBI Old Locus Tag	PSPTO0464
Name	Synonym: PSPTO0464
Replicon	chromosome
Genomic location	509006 - 509953 (- strand)

Cross-References

RefSeq	NP_790313.1
GI	28867694
Entrez	1182073
INSDC	AAO54008.1
NCBI Locus Tag	PSPTO_0464
NCBI Old Locus Tag	PSPTO0464
UniParc	UPI000000844A
UniProtKB Acc	Q88AC8
UniProtKB ID	Q88AC8_PSESM
UniRef100	UniRef100_Q88AC8
UniRef50	UniRef50_Q3J4F1
UniRef90	UniRef90_S3MMI5

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.63
Kyte-Doolittle Hydrophobicity Value	-0.285
Molecular Weight (kDa)	34.5
Isoelectric Point (pI)	8.02

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 130 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004940 (511 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0464 Search term: glycine betaine/L-proline ABC transporter, periplasmic substrate-binding protein

Human Homologs

References