Pseudomonas syringae pv. tomato DC3000, PSPTO_0445

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0445
NCBI Old Locus Tag	PSPTO0445
Name	Synonym: PSPTO0445
Replicon	chromosome
Genomic location	489653 - 490645 (+ strand)

Cross-References

RefSeq	NP_790294.1
GI	28867675
Entrez	1182054
INSDC	AAO53989.1
NCBI Locus Tag	PSPTO_0445
NCBI Old Locus Tag	PSPTO0445
UniParc	UPI0000008439
UniProtKB Acc	Q88AE5
UniProtKB ID	Q88AE5_PSESM
UniRef100	UniRef100_Q88AE5
UniRef50	UniRef50_A0A077JKA4
UniRef90	UniRef90_Q88AE5

Product

Feature Type	CDS
Coding Frame	1
Product Name	regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.58
Kyte-Doolittle Hydrophobicity Value	-0.198
Molecular Weight (kDa)	36.1
Isoelectric Point (pI)	6.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 123 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000462 (1708 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0445 Search term: regulatory protein

Human Homologs

References